Transcript: lnc-DTNBP1-16:12

Basic information

LNCipedia transcript ID: lnc-DTNBP1-16:12 
LNCipedia gene ID: lnc-DTNBP1-16
Ensembl Gene ID: ENSG00000234261
Ensembl Transcript ID: ENST00000629853
Location (hg38): chr6:14661829-15021964
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 778 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629853.2
Alternative gene names: ENSG00000234261.3; RP11-146I2.1; AL138720.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.9496 non-coding 
CPAT coding probability 2.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTNBP1-16:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DTNBP1-5:3
4.1 lnc-DTNBP1-5:3
5.0 lnc-DTNBP1-5:3
5.1 lnc-C6orf62-130:12
5.2 lnc-DTNBP1-16:12