Transcript: lnc-DTNBP1-16:39

Basic information

LNCipedia transcript ID: lnc-DTNBP1-16:39 
LNCipedia gene ID: lnc-DTNBP1-16
Location (hg38): chr6:14444665-14448737
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 474 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012087; NONHSAT107842
Alternative gene names: XLOC_005617; linc-CCDC90A-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.6076 non-coding 
CPAT coding probability 7.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTNBP1-16:39 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCDC90A-5:1
3.1 lnc-CCDC90A-5:1
4.0 lnc-CCDC90A-5:1
4.1 lnc-DTNBP1-5:45
5.0 lnc-DTNBP1-5:45
5.1 lnc-C6orf62-130:39
5.2 lnc-DTNBP1-16:39