Transcript: lnc-DTWD2-5:1

Basic information

LNCipedia transcript ID: lnc-DTWD2-5:1 
LNCipedia gene ID: lnc-DTWD2-5
Ensembl Gene ID: ENSG00000261036
Ensembl Transcript ID: ENST00000569928
Location (hg38): chr5:120345907-120404837
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 517 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569928.1; RP11-574H6.1-001; OTTHUMT00000423218.1; NONHSAT103444
Alternative gene names: ENSG00000261036.1; RP11-574H6.1; OTTHUMG00000173468.1; AC113418.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -117.9792 non-coding 
CPAT coding probability 13.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTWD2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DTWD2-5:1
4.0 lnc-DTWD2-5:1
4.1 lnc-DTWD2-5:1
5.0 lnc-DTWD2-5:1
5.1 lnc-LOX-20:5
5.2 lnc-DTWD2-5:1