Transcript: lnc-DTX3L-1:2

Basic information

LNCipedia transcript ID: lnc-DTX3L-1:2 
LNCipedia gene ID: lnc-DTX3L-1
Location (hg38): chr3:122515029-122515990
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 962 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000061571.1|FTMT21200006225.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.0773 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTX3L-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DTX3L-1:2
5.0 lnc-DTX3L-1:2
5.1 lnc-DTX3L-1:2
5.2 lnc-DTX3L-1:2