Transcript: lnc-DTYMK-1:1

Basic information

LNCipedia transcript ID: lnc-DTYMK-1:1 
LNCipedia gene ID: lnc-DTYMK-1
Ensembl Gene ID: ENSG00000235351
Ensembl Transcript ID: ENST00000435195
Location (hg38): chr2:241724615-241725693
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 584 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000435195.1; AC114730.11-001; OTTHUMT00000322917.1
Alternative gene names: ENSG00000235351.1; AC114730.11; OTTHUMG00000151506.1; AC114730.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.4048 non-coding 
CPAT coding probability 42.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DTYMK-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DTYMK-1:1
4.0 lnc-DTYMK-1:1
4.1 lnc-DTYMK-1:1
5.0 lnc-DTYMK-1:1
5.1 lnc-PDCD1-8:2
5.2 lnc-DTYMK-1:1