Transcript: lnc-DUSP1-4:9

Basic information

LNCipedia transcript ID: lnc-DUSP1-4:9 
LNCipedia gene ID: lnc-DUSP1-4
Location (hg38): chr5:172955154-172959381
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2071 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000204758.3|ENST00000518818.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.4278 non-coding 
CPAT coding probability 10.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DUSP1-4:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DUSP1-4:9
5.0 lnc-DUSP1-4:9
5.1 lnc-PDLIM7-74:5
5.2 lnc-DUSP1-4:9