Transcript: lnc-DYNC1H1-1:3

Basic information

LNCipedia transcript ID: lnc-DYNC1H1-1:3 
LNCipedia gene ID: lnc-DYNC1H1-1
Ensembl Gene ID: ENSG00000272444
Ensembl Transcript ID: ENST00000607122
Location (hg38): chr14:101952416-101953063
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 648 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607122.1
Alternative gene names: ENSG00000272444.1; RP11-1017G21.6; AL118558.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.8256 non-coding 
CPAT coding probability 3.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DYNC1H1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DYNC1H1-1:3
4.0 lnc-DYNC1H1-1:3
4.1 lnc-DYNC1H1-1:3
5.0 lnc-DYNC1H1-1:3
5.1 lnc-TECPR2-7:8
5.2 lnc-DYNC1H1-1:3