Transcript: lnc-DYNLRB2-3:1

Basic information

LNCipedia transcript ID: lnc-DYNLRB2-3:1 
LNCipedia gene ID: lnc-DYNLRB2-3
Ensembl Gene ID: ENSG00000260706
Ensembl Transcript ID: ENST00000567851
Location (hg38): chr16:80065836-80157655
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 581 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567851.1; RP11-525K10.1-001; OTTHUMT00000434558.1; NONHSAT143878; ENST00000567851.5
Alternative gene names: ENSG00000260706.1; RP11-525K10.1; OTTHUMG00000176979.1; ENSG00000260706.5; AC022166.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.5088 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DYNLRB2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DYNLRB2-3:1
4.0 lnc-DYNLRB2-3:1
4.1 lnc-DYNLRB2-3:1
5.0 lnc-DYNLRB2-3:1
5.1 lnc-CRISPLD2-79:1
5.2 lnc-DYNLRB2-3:1