Transcript: lnc-DYNLRB2-4:1

Basic information

LNCipedia transcript ID: lnc-DYNLRB2-4:1 
LNCipedia gene ID: lnc-DYNLRB2-4
Ensembl Gene ID: ENSG00000260237
Ensembl Transcript ID: ENST00000565531
Location (hg38): chr16:80040662-80045745
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565531.1; RP11-148M9.1-001; OTTHUMT00000434557.1; NONHSAT143877
Alternative gene names: ENSG00000260237.1; RP11-148M9.1; OTTHUMG00000176978.1; AC092130.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -182.5376 non-coding 
CPAT coding probability 8.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DYNLRB2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DYNLRB2-4:1
4.0 lnc-DYNLRB2-4:1
4.1 lnc-DYNLRB2-4:1
5.0 lnc-DYNLRB2-4:1
5.1 lnc-CRISPLD2-80:1
5.2 lnc-DYNLRB2-4:1