Transcript: lnc-EBAG9-2:1

Basic information

LNCipedia transcript ID: lnc-EBAG9-2:1 
LNCipedia gene ID: lnc-EBAG9-2
Location (hg38): chr8:109975485-110642590
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10814 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000100233.1|MICT00000349532.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.3981 non-coding 
CPAT coding probability 3.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBAG9-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-422N16.3.1-2:2
5.0 lnc-RP11-422N16.3.1-2:2
5.1 lnc-COLEC10-35:1
5.2 lnc-EBAG9-2:1