Transcript: lnc-EBAG9-4:2

Basic information

LNCipedia transcript ID: lnc-EBAG9-4:2 
LNCipedia gene ID: lnc-EBAG9-4
Location (hg38): chr8:111699515-111700268
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 396 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014832; NONHSAT128331
Alternative gene names: XLOC_006902; linc-UTP23-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.665 non-coding 
CPAT coding probability 12.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBAG9-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-67H2.1.1-3:1
3.1 lnc-RP11-67H2.1.1-3:1
4.0 lnc-RP11-67H2.1.1-3:1
4.1 lnc-RP11-67H2.1.1-3:1
5.0 lnc-RP11-67H2.1.1-3:1
5.1 lnc-COLEC10-29:2
5.2 lnc-EBAG9-4:2