Transcript: lnc-EBAG9-7:1

Basic information

LNCipedia transcript ID: lnc-EBAG9-7:1 
LNCipedia gene ID: lnc-EBAG9-7
Location (hg38): chr8:111162540-111182696
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 224 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3668_chr8:112174768-112194925_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBAG9-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-422N16.3.1-7:1
4.0 lnc-RP11-422N16.3.1-7:1
4.1 lnc-RP11-422N16.3.1-7:1
5.0 lnc-RP11-422N16.3.1-7:1
5.1 lnc-COLEC10-31:1
5.2 lnc-EBAG9-7:1