Transcript: lnc-EBAG9-9:1

Basic information

LNCipedia transcript ID: lnc-EBAG9-9:1 
LNCipedia gene ID: lnc-EBAG9-9
Ensembl Gene ID: ENSG00000248050
Ensembl Transcript ID: ENST00000499579
Location (hg38): chr8:109644115-109648084
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3075 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000499579.1
Alternative gene names: ENSG00000248050.1; RP11-422N16.3; AC079061.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.9834 non-coding 
CPAT coding probability 15.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBAG9-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-422N16.3.1-9:1
4.1 lnc-RP11-422N16.3.1-9:1
5.0 lnc-RP11-422N16.3.1-9:1
5.1 lnc-COLEC10-37:1
5.2 lnc-EBAG9-9:1