Transcript: lnc-EBF3-16:1

Basic information

LNCipedia transcript ID: lnc-EBF3-16:1 
LNCipedia gene ID: lnc-EBF3-16
Location (hg38): chr10:129262200-129270807
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1313 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_404_chr10:131060463-131069071_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.5478 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBF3-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EBF3-16:1
4.0 lnc-EBF3-16:1
4.1 lnc-EBF3-16:1
5.0 lnc-EBF3-16:1
5.1 lnc-ADAM12-21:1
5.2 lnc-EBF3-16:1