Transcript: lnc-EDDM13-1:3

Basic information

LNCipedia transcript ID: lnc-EDDM13-1:3 
LNCipedia gene ID: lnc-EDDM13-1
Location (hg38): chr19:56284134-56286680
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 399 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000586573.5
Alternative gene names: ENSG00000267710.5; AC006116.20


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -204.1131 non-coding 
CPAT coding probability 4.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDDM13-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZSCAN5C-1:6
4.1 lnc-ZSCAN5C-1:6
5.0 lnc-ZSCAN5C-1:6
5.1 lnc-ZNF583-9:3
5.2 lnc-EDDM13-1:3