Transcript: lnc-EDDM13-1:8

Basic information

LNCipedia transcript ID: lnc-EDDM13-1:8 
LNCipedia gene ID: lnc-EDDM13-1
Location (hg38): chr19:56301936-56310446
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 540 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000593151.2
Alternative gene names: ENSG00000267710.5; AC006116.20


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.561 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDDM13-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ZSCAN5C-1:8
4.1 lnc-ZSCAN5C-1:8
5.0 lnc-ZSCAN5C-1:8
5.1 lnc-ZNF583-9:8
5.2 lnc-EDDM13-1:8