Transcript: lnc-EDEM3-6:2

Basic information

LNCipedia transcript ID: lnc-EDEM3-6:2 
LNCipedia gene ID: lnc-EDEM3-6
Location (hg38): chr1:184384960-184386888
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1929 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271387.1|ENCT00000035166.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.4641 non-coding 
CPAT coding probability 3.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDEM3-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EDEM3-6:2
5.0 lnc-EDEM3-6:2
5.1 lnc-MYOG-156:1
5.2 lnc-EDEM3-6:2