Transcript: lnc-EDRF1-1:21

Basic information

LNCipedia transcript ID: lnc-EDRF1-1:21 
LNCipedia gene ID: lnc-EDRF1-1
Location (hg38): chr10:125683243-125710058
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3530 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT016886; ENST00000415305.2
Alternative gene names: ENSG00000228021.3; RP11-383C5.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.9232 non-coding 
CPAT coding probability 4.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDRF1-1:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf137-1:8
4.0 lnc-C10orf137-1:8
4.1 lnc-C10orf137-1:8
5.0 lnc-C10orf137-1:8
5.1 lnc-EDRF1-1:5
5.2 lnc-EDRF1-1:21