Transcript: lnc-EEPD1-49:2

Basic information

LNCipedia transcript ID: lnc-EEPD1-49:2 
LNCipedia gene ID: lnc-EEPD1-49
Location (hg38): chr7:36084245-36099801
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1375 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT120110
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.1754 non-coding 
CPAT coding probability 12.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EEPD1-49:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC083864.4.1-1:5
4.0 lnc-AC083864.4.1-1:5
4.1 lnc-AC083864.4.1-1:5
5.0 lnc-AC083864.4.1-1:5
5.1 lnc-CCDC129-49:2
5.2 lnc-EEPD1-49:2