Transcript: lnc-EEPD1-49:6

Basic information

LNCipedia transcript ID: lnc-EEPD1-49:6 
LNCipedia gene ID: lnc-EEPD1-49
RefSeq ID: NR_108089
Location (hg38): chr7:36095310-36100653
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1733 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108089.1
Alternative gene names: LOC101928618


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.4357 non-coding 
CPAT coding probability 3.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EEPD1-49:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CCDC129-49:6
5.1 lnc-CCDC129-49:6
5.2 lnc-EEPD1-49:6