Transcript: lnc-EEPD1-49:7

Basic information

LNCipedia transcript ID: lnc-EEPD1-49:7 
LNCipedia gene ID: lnc-EEPD1-49
Location (hg38): chr7:36095313-36100644
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1721 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00012877
Alternative gene names: XLOC_006045; linc-EEPD1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.4357 non-coding 
CPAT coding probability 6.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EEPD1-49:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC083864.4.1-1:1
3.1 lnc-AC083864.4.1-1:3
4.0 lnc-AC083864.4.1-1:3
4.1 lnc-AC083864.4.1-1:3
5.0 lnc-AC083864.4.1-1:3
5.1 lnc-CCDC129-49:7
5.2 lnc-EEPD1-49:7