Transcript: lnc-EFNB2-8:3

Basic information

LNCipedia transcript ID: lnc-EFNB2-8:3 
LNCipedia gene ID: lnc-EFNB2-8
Location (hg38): chr13:106227511-106374031
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6205 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000017973.1|MICT00000098590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 26.5637 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EFNB2-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EFNB2-8:3
5.0 lnc-EFNB2-8:3
5.1 lnc-IRS2-20:2
5.2 lnc-EFNB2-8:3