Transcript: lnc-EFR3A-1:5

Basic information

LNCipedia transcript ID: lnc-EFR3A-1:5 
LNCipedia gene ID: lnc-EFR3A-1
Location (hg38): chr8:131312377-131318562
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2636 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT129174
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.4058 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EFR3A-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EFR3A-1:5
4.0 lnc-EFR3A-1:5
4.1 lnc-EFR3A-1:5
5.0 lnc-EFR3A-1:5
5.1 lnc-MYC-31:7
5.2 lnc-EFR3A-1:5