Transcript: lnc-EGFL6-8:4

Basic information

LNCipedia transcript ID: lnc-EGFL6-8:4 
LNCipedia gene ID: lnc-EGFL6-8
Location (hg38): chrX:13395260-13396319
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 450 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_34269_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.6393 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EGFL6-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EGFL6-1:4
4.0 lnc-EGFL6-1:4
4.1 LINC01203:19
5.0 LINC01203:19
5.1 lnc-GK-207:4
5.2 lnc-EGFL6-8:4