Transcript: lnc-EIF2AK4-9:1

Basic information

LNCipedia transcript ID: lnc-EIF2AK4-9:1 
LNCipedia gene ID: lnc-EIF2AK4-9
Ensembl Gene ID: ENSG00000276107
Ensembl Transcript ID: ENST00000478845
Location (hg38): chr15:39586561-39587293
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 733 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000478845.2
Alternative gene names: ENSG00000276107.1; CTD-2033D15.2; AC037198.2; AC037198.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.9262 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EIF2AK4-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C15orf54-4:3
4.1 lnc-C15orf54-4:3
5.0 lnc-C15orf54-4:3
5.1 lnc-TMEM62-88:2
5.2 lnc-EIF2AK4-9:1