Transcript: lnc-EIF2B1-1:5

Basic information

LNCipedia transcript ID: lnc-EIF2B1-1:5 
LNCipedia gene ID: lnc-EIF2B1-1
Location (hg38): chr12:123575898-123578291
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 366 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020961; NONHSAT031597
Alternative gene names: XLOC_010228; linc-RILPL1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.9561 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EIF2B1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EIF2B1-2:1
3.1 lnc-EIF2B1-2:1
4.0 lnc-EIF2B1-1:5
4.1 lnc-EIF2B1-1:5
5.0 lnc-EIF2B1-1:5
5.1 lnc-SBNO1-11:13
5.2 lnc-EIF2B1-1:5