Transcript: lnc-EIF4E3-8:1

Basic information

LNCipedia transcript ID: lnc-EIF4E3-8:1 
LNCipedia gene ID: lnc-EIF4E3-8
Ensembl Gene ID: ENSG00000277539
Ensembl Transcript ID: ENST00000620572
Location (hg38): chr3:71276087-71289616
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 449 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620572.1
Alternative gene names: ENSG00000277539.1; RP11-298C2.1; AC138058.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -473.7834 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EIF4E3-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-EIF4E3-8:1
4.1 lnc-EIF4E3-8:1
5.0 lnc-EIF4E3-8:1
5.1 lnc-FRMD4B-9:1
5.2 lnc-EIF4E3-8:1