Transcript: lnc-EIF4ENIF1-1:1

Basic information

LNCipedia transcript ID: lnc-EIF4ENIF1-1:1 
LNCipedia gene ID: lnc-EIF4ENIF1-1
Location (hg38): chr22:31436977-31439907
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 597 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000441289.1; RP11-247I13.7-001; OTTHUMT00000127945.1; NONHSAT084890
Alternative gene names: ENSG00000240529.1; RP11-247I13.7; OTTHUMG00000057562.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -198.2307 non-coding 
CPAT coding probability 9.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EIF4ENIF1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF4ENIF1-1:1
4.0 lnc-EIF4ENIF1-1:1
4.1 lnc-EIF4ENIF1-1:1
5.0 lnc-EIF4ENIF1-1:1
5.1 lnc-EIF4ENIF1-1:1
5.2 lnc-EIF4ENIF1-1:1