Transcript: lnc-ELAC2-2:1

Basic information

LNCipedia transcript ID: lnc-ELAC2-2:1 
LNCipedia gene ID: lnc-ELAC2-2
Location (hg38): chr17:12973033-12973834
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 802 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000582758.1; RP11-1090M7.3-001; OTTHUMT00000441599.1; NONHSAT145709
Alternative gene names: ENSG00000266438.1; RP11-1090M7.3; OTTHUMG00000178335.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.101 non-coding 
CPAT coding probability 27.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELAC2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ELAC2-2:1
4.0 lnc-ELAC2-2:1
4.1 lnc-ELAC2-2:1
5.0 lnc-ELAC2-2:1
5.1 lnc-GAS7-26:1
5.2 lnc-ELAC2-2:1