Transcript: lnc-ELAVL2-1:6

Basic information

LNCipedia transcript ID: lnc-ELAVL2-1:6 
LNCipedia gene ID: lnc-ELAVL2-1
Location (hg38): chr9:23490692-23662387
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4804 bp
Exons: 28
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003zpr_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 39.156 non-coding 
CPAT coding probability 4.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELAVL2-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ELAVL2-1:6
4.0 lnc-ELAVL2-1:6
4.1 lnc-ELAVL2-1:6
5.0 lnc-ELAVL2-1:6
5.1 lnc-FREM1-58:7
5.2 lnc-ELAVL2-1:6