Transcript: lnc-ELAVL2-1:7

Basic information

LNCipedia transcript ID: lnc-ELAVL2-1:7 
LNCipedia gene ID: lnc-ELAVL2-1
RefSeq ID: NR_121602
Location (hg38): chr9:23500691-23672399
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4817 bp
Exons: 28
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121602; NR_121602.1
Alternative gene names: LOC101929563


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.0251 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELAVL2-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ELAVL2-1:7
4.0 lnc-ELAVL2-1:7
4.1 lnc-ELAVL2-1:7
5.0 lnc-ELAVL2-1:7
5.1 lnc-FREM1-58:3
5.2 lnc-ELAVL2-1:7