Transcript: lnc-ELF1-2:2

Basic information

LNCipedia transcript ID: lnc-ELF1-2:2 
LNCipedia gene ID: lnc-ELF1-2
Location (hg38): chr13:40796985-40921750
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4191 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT033347; NR_038259
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 175.6743 coding 
CPAT coding probability 7.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ELF1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUGT1P3-5:4
4.0 lnc-SUGT1P3-5:4
4.1 lnc-SUGT1P3-5:4
5.0 lnc-SUGT1P3-5:4
5.1 lnc-CCDC169-57:2
5.2 lnc-ELF1-2:2