Transcript: lnc-ELFN2-2:5

Basic information

LNCipedia transcript ID: lnc-ELFN2-2:5 
LNCipedia gene ID: lnc-ELFN2-2
Location (hg38): chr22:37375763-37427470
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 558 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000415408.1; RP1-63G5.5-003; OTTHUMT00000318912.1
Alternative gene names: ENSG00000243902.1; RP1-63G5.5; OTTHUMG00000150561.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -279.7593 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELFN2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFNG-2:1
4.0 lnc-ELFN2-2:5
4.1 lnc-ELFN2-2:5
5.0 lnc-ELFN2-2:5
5.1 lnc-MYH9-23:1
5.2 lnc-ELFN2-2:5