Transcript: lnc-ELFN2-2:6

Basic information

LNCipedia transcript ID: lnc-ELFN2-2:6 
LNCipedia gene ID: lnc-ELFN2-2
Ensembl Gene ID: ENSG00000243902
Ensembl Transcript ID: ENST00000452946
Location (hg38): chr22:37340644-37427445
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 577 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452946.1; RP1-63G5.5-002; OTTHUMT00000318911.1; NONHSAT085162
Alternative gene names: ENSG00000243902.1; RP1-63G5.5; OTTHUMG00000150561.1; ENSG00000243902.2; ENSG00000243902.6; ELFN2; FP325335.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.7442 non-coding 
CPAT coding probability 7.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELFN2-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFNG-2:2
4.0 lnc-ELFN2-2:6
4.1 lnc-ELFN2-2:6
5.0 lnc-ELFN2-2:6
5.1 lnc-MYH9-23:3
5.2 lnc-ELFN2-2:6