Transcript: lnc-ELK4-1:4

Basic information

LNCipedia transcript ID: lnc-ELK4-1:4 
LNCipedia gene ID: lnc-ELK4-1
Location (hg38): chr1:205532662-205569256
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 19996 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000091000.1|MICT00000028905.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.9525 non-coding 
CPAT coding probability 5.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELK4-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ELK4-1:4
5.0 lnc-ELK4-1:4
5.1 lnc-NUCKS1-9:2
5.2 lnc-ELK4-1:4