Transcript: lnc-ELN-3:2

Basic information

LNCipedia transcript ID: lnc-ELN-3:2 
LNCipedia gene ID: lnc-ELN-3
Location (hg38): chr7:73987974-73988766
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 474 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000567474.1; RP11-731K22.1-002; OTTHUMT00000422327.1; NONHSAT121432
Alternative gene names: ENSG00000261467.1; RP11-731K22.1; OTTHUMG00000173182.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.3085 non-coding 
CPAT coding probability 4.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELN-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ELN-1:2
4.0 lnc-ELN-3:2
4.1 lnc-ELN-3:2
5.0 lnc-ELN-3:2
5.1 lnc-FKBP6-25:2
5.2 lnc-ELN-3:2