Transcript: lnc-ELP2-2:1

Basic information

LNCipedia transcript ID: lnc-ELP2-2:1 
LNCipedia gene ID: lnc-ELP2-2
Ensembl Gene ID: ENSG00000274849
Ensembl Transcript ID: ENST00000612081
Location (hg38): chr18:36189824-36190272
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 449 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612081.1
Alternative gene names: ENSG00000274849.1; RP11-49I11.4; AC023043.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.7436 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELP2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ELP2-2:1
4.1 lnc-ELP2-2:1
5.0 lnc-ELP2-2:1
5.1 lnc-CTIF-104:1
5.2 lnc-ELP2-2:1