Transcript: lnc-EMC1-1:2

Basic information

LNCipedia transcript ID: lnc-EMC1-1:2 
LNCipedia gene ID: lnc-EMC1-1
Location (hg38): chr1:19254791-19262339
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6101 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT001288
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
LRGEVGLLFTNR 97.2972972972973% antisense-3
Lee translation initiation sites 0 non-coding 
PhyloCSF score 166.2137 coding 
CPAT coding probability 67.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EMC1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0090-1:2
4.0 lnc-KIAA0090-1:2
4.1 lnc-KIAA0090-1:2
5.0 lnc-KIAA0090-1:2
5.1 lnc-CAMK2N1-20:2
5.2 lnc-EMC1-1:2