Transcript: lnc-EMC3-1:11

Basic information

LNCipedia transcript ID: lnc-EMC3-1:11 
LNCipedia gene ID: lnc-EMC3-1
Location (hg38): chr3:10006431-10011304
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1724 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT087865
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 82.6946 coding 
CPAT coding probability 29.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EMC3-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRRT3-1:7
4.0 lnc-TMEM111-1:5
4.1 lnc-TMEM111-1:5
5.0 lnc-TMEM111-1:5
5.1 lnc-EMC3-1:1
5.2 lnc-EMC3-1:11