Transcript: lnc-EMC8-6:5

Basic information

LNCipedia transcript ID: lnc-EMC8-6:5 
LNCipedia gene ID: lnc-EMC8-6
Location (hg38): chr16:86086245-86089144
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2472 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025078
Alternative gene names: XLOC_012041; linc-COX4NB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.5561 non-coding 
CPAT coding probability 14.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMC8-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC092327.1-5:2
3.1 lnc-AC092327.1-5:3
4.0 lnc-AC092327.1-5:3
4.1 lnc-AC092327.1-5:3
5.0 lnc-AC092327.1-5:3
5.1 lnc-MTHFSD-5:12
5.2 lnc-EMC8-6:5