Transcript: lnc-EMP2-1:3

Basic information

LNCipedia transcript ID: lnc-EMP2-1:3 
LNCipedia gene ID: lnc-EMP2-1
Location (hg38): chr16:9753411-9760699
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 7289 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT140478
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.0856 non-coding 
CPAT coding probability 4.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMP2-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRIN2A-1:2
4.0 lnc-GRIN2A-1:2
4.1 lnc-GRIN2A-1:2
5.0 lnc-GRIN2A-1:2
5.1 lnc-PARN-87:1
5.2 lnc-EMP2-1:3