Transcript: lnc-EMP3-1:3

Basic information

LNCipedia transcript ID: lnc-EMP3-1:3 
LNCipedia gene ID: lnc-EMP3-1
Location (hg38): chr19:48321467-48322871
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 299 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027590; NONHSAT067062
Alternative gene names: XLOC_013108; linc-EMP3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMP3-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EMP3-1:3
3.1 lnc-EMP3-1:3
4.0 lnc-EMP3-1:3
4.1 lnc-EMP3-1:3
5.0 lnc-EMP3-1:3
5.1 lnc-EMP3-1:3
5.2 lnc-EMP3-1:3