Transcript: lnc-EMSY-2:1

Basic information

LNCipedia transcript ID: lnc-EMSY-2:1 
LNCipedia gene ID: lnc-EMSY-2
Ensembl Gene ID: ENSG00000271757
Ensembl Transcript ID: ENST00000607673
Location (hg38): chr11:76392196-76392905
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 710 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607673.1
Alternative gene names: ENSG00000271757.1; RP11-111M22.5; AP002360.3; AP002360.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.8805 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMSY-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf30-2:1
4.0 lnc-C11orf30-2:1
4.1 lnc-C11orf30-2:1
5.0 lnc-C11orf30-2:1
5.1 lnc-DDIAS-70:1
5.2 lnc-EMSY-2:1