Transcript: lnc-ENDOD1-1:10

Basic information

LNCipedia transcript ID: lnc-ENDOD1-1:10 
LNCipedia gene ID: lnc-ENDOD1-1
RefSeq ID: NR_110295
Location (hg38): chr11:95230186-95234404
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1960 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110295; NR_110295.1
Alternative gene names: LOC100129203


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.9881 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENDOD1-1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ENDOD1-1:10
4.0 lnc-ENDOD1-1:10
4.1 lnc-ENDOD1-1:10
5.0 lnc-ENDOD1-1:10
5.1 lnc-TRIM49C-53:7
5.2 lnc-ENDOD1-1:10