Transcript: lnc-ENPP1-1:3

Basic information

LNCipedia transcript ID: lnc-ENPP1-1:3 
LNCipedia gene ID: lnc-ENPP1-1
Ensembl Gene ID: ENSG00000236673
Ensembl Transcript ID: ENST00000419695
Location (hg38): chr6:131903648-131907530
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 712 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419695; ENST00000419695.1; RP11-69I8.2-003; OTTHUMT00000316060.1; NONHSAT114932
Alternative gene names: ENSG00000236673; RP11-69I8.2; ENSG00000236673.1; OTTHUMG00000055854.2; ENSG00000236673.5; AL117378.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 66.8775 coding 
CPAT coding probability 24.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ENPP1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENPP1-1:3
3.1 lnc-ENPP1-1:3
4.0 lnc-ENPP1-1:3
4.1 lnc-ENPP1-1:3
5.0 lnc-ENPP1-1:3
5.1 lnc-TBPL1-41:3
5.2 lnc-ENPP1-1:3