Transcript: lnc-ENPP1-3:1

Basic information

LNCipedia transcript ID: lnc-ENPP1-3:1 
LNCipedia gene ID: lnc-ENPP1-3
Ensembl Gene ID: ENSG00000236166
Ensembl Transcript ID: ENST00000430428
Location (hg38): chr6:132085084-132099279
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 552 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011370; ENST00000430428; ENST00000430428.1; RP3-523C21.2-002; OTTHUMT00000316065.1; NONHSAT114938
Alternative gene names: XLOC_005464; linc-TAAR9-2; ENSG00000236166; RP3-523C21.2; ENSG00000236166.1; OTTHUMG00000055852.2; AL021408.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.1021 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENPP1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ENPP1-2:1
3.1 lnc-ENPP1-3:1
4.0 lnc-ENPP1-3:1
4.1 lnc-ENPP1-3:1
5.0 lnc-ENPP1-3:1
5.1 lnc-TBPL1-39:6
5.2 lnc-ENPP1-3:1