Transcript: lnc-ENTPD1-1:2

Basic information

LNCipedia transcript ID: lnc-ENTPD1-1:2 
LNCipedia gene ID: lnc-ENTPD1-1
Ensembl Gene ID: ENSG00000240527
Ensembl Transcript ID: ENST00000433113
Location (hg38): chr10:95833508-95873758
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 587 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433113.1; RP11-429G19.3-001; OTTHUMT00000049558.1; NONHSAT015767
Alternative gene names: ENSG00000240527.1; RP11-429G19.3; OTTHUMG00000018817.1; AL365273.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.1629 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENTPD1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf131-1:1
4.0 lnc-C10orf131-1:1
4.1 lnc-C10orf131-1:1
5.0 lnc-C10orf131-1:1
5.1 lnc-SMC3-215:1
5.2 lnc-ENTPD1-1:2