Transcript: lnc-EPB42-1:3

Basic information

LNCipedia transcript ID: lnc-EPB42-1:3 
LNCipedia gene ID: lnc-EPB42-1
Location (hg38): chr15:43171882-43185878
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 13997 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261687.1|FTMT25800001276.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 79.2045 coding 
CPAT coding probability 12.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EPB42-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EPB42-1:3
5.0 lnc-EPB42-1:3
5.1 lnc-EPB42-1:3
5.2 lnc-EPB42-1:3