Transcript: lnc-EPG5-1:3

Basic information

LNCipedia transcript ID: lnc-EPG5-1:3 
LNCipedia gene ID: lnc-EPG5-1
Ensembl Gene ID: ENSG00000267414
Ensembl Transcript ID: ENST00000592638
Location (hg38): chr18:44676927-44679717
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2065 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059093; ENST00000592638.1
Alternative gene names: ENSG00000267414.1; RP11-456K23.1; AC120049.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.9171 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPG5-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPG5-1:3
4.0 lnc-EPG5-1:3
4.1 lnc-EPG5-1:3
5.0 lnc-EPG5-1:3
5.1 lnc-SMAD2-38:7
5.2 lnc-EPG5-1:3