Transcript: lnc-EPHB2-1:1

Basic information

LNCipedia transcript ID: lnc-EPHB2-1:1 
LNCipedia gene ID: lnc-EPHB2-1
Location (hg38): chr1:22916682-22921500
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4819 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000610135.1
Alternative gene names: ENSG00000272796.1; RP1-74M1.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.9644 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPHB2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPHB2-1:1
4.0 lnc-EPHB2-1:1
4.1 lnc-EPHB2-1:1
5.0 lnc-EPHB2-1:1
5.1 lnc-EPHB2-1:1
5.2 lnc-EPHB2-1:1